{ "_id": "6aca479bfe5cc25786e867c3", "Package": "relMix", "Type": "Package", "Title": "Relationship Inference for DNA Mixtures", "Version": "1.4.1", "Date": "2025-01-07", "Authors@R": "c(\nperson('Guro', 'Dorum', email = 'guro.dorum@gmail.com', role = c('aut', 'cre')),\nperson('Elias', 'Hernandis', role = c('aut')),\nperson('Navreet', 'Kaur', role = c('ctb')),\nperson('Thore', 'Egeland', role = c('ctb')),\nperson('Magnus Dehli', 'Vigeland', role = c('ctb')))", "Description": "Analysis of DNA mixtures involving relatives by\ncomputation of likelihood ratios that account for dropout and\ndrop-in, mutations, silent alleles and population substructure.\nThis is useful in kinship cases, like non-invasive prenatal\npaternity testing, where deductions about individuals'\nrelationships rely on DNA mixtures, and in criminal cases where\nthe contributors to a mixed DNA stain may be related.\nRelationships are represented by pedigrees and can include\nkinship between more than two individuals. The main function is\nrelMix() and its graphical user interface relMixGUI(). The\nimplementation and method is described in Dorum et al. (2017)\n, Hernandis et al. (2019)\n and Kaur et al. (2016)\n.", "VignetteBuilder": "knitr", "Encoding": "UTF-8", "SystemRequirements": "tcltk, tk", "License": "GPL (>=2)", "RoxygenNote": "7.3.2", "URL": "https://gdorum.github.io/relMix/", "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libfribidi-dev make libharfbuzz-dev libicu-dev\nlibjpeg-dev libpng-dev libtiff-dev libuv1-dev libwebp-dev\nlibxml2-dev libssl-dev tk-dev", "Repository": "https://gdorum.r-universe.dev", "Date/Publication": "2025-01-21 14:09:21 UTC", "RemoteUrl": "https://github.com/gdorum/relmix", "RemoteRef": "HEAD", "RemoteSha": "9790450daf4148009f3b72d281a35131d6c8f8b7", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 13:58:21 UTC", "User": "root" }, "Author": "Guro Dorum [aut, cre],\nElias Hernandis [aut],\nNavreet Kaur [ctb],\nThore Egeland [ctb],\nMagnus Dehli Vigeland [ctb]", "Maintainer": "Guro Dorum ", "_user": "gdorum", "_type": "src", "_file": "relMix_1.4.1.tar.gz", "_fileid": 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"page": "checkFrequenciesFile", "title": "Load and check a frequency file", "topics": [ "checkFrequenciesFile" ] }, { "page": "checkMixtureFile", "title": "Load and check a mixture file", "topics": [ "checkMixtureFile" ] }, { "page": "checkPedigreeFile", "title": "Check a pedigree file", "topics": [ "checkPedigreeFile" ] }, { "page": "checkReferenceFile", "title": "Check a reference profiles file", "topics": [ "checkReferenceFile" ] }, { "page": "createDatamatrix", "title": "Create data matrix with possible genotype combinations for specified individuals", "topics": [ "createDatamatrix" ] }, { "page": "db", "title": "Allele database", "topics": [ "db" ] }, { "page": "db2", "title": "Allele database for 22 markers", "topics": [ "db2" ] }, { "page": "generateMix", "title": "Create a mixture of genotypes with simulated drop-in and dropout", "topics": [ "generateMix" ] }, { "page": "mixLikDrop", "title": "Likelihoods for DNA mixtures with dropout and dropin", "topics": [ "mixLikDrop" ] }, { "page": "relMix", "title": "Relationship inference based on mixtures", "topics": [ "relMix" ] }, { "page": "relMixGUI", "title": "GUI for relMix", "topics": [ "relMixGUI" ] } ], "_readme": "https://github.com/gdorum/relmix/raw/HEAD/README.md", "_rundeps": [ "askpass", "base64enc", "bslib", "cachem", "cli", "codetools", "cpp11", "data.table", "digest", "dplyr", "evaluate", "Familias", "fastmap", "flextable", "fontawesome", "fontBitstreamVera", "fontLiberation", "fontquiver", "fs", "future", "future.apply", "gdtools", "generics", "globals", "glue", "highr", "htmltools", "jquerylib", "jsonlite", "kinship2", "knitr", "lattice", "lifecycle", "listenv", "lpSolve", "magrittr", "Matrix", "memoise", "mime", "numDeriv", "officer", "openssl", "parallelly", "pedFamilias", "pedmut", "pedtools", "pillar", "pkgconfig", "purrr", "quadprog", "R6", "ragg", "rappdirs", "Rcpp", "RcppArmadillo", "rlang", "rmarkdown", "Rsolnp", "sass", "stringi", "stringr", "sys", "systemfonts", "textshaping", "tibble", 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